- Full text search for der on all pages in this database using
- Full text search for der on all pages of this website using
Search Results for der
using database Escherichia coli K-12 substr. MG1655 what is this?
Pathways (15) | Genes (3) | Proteins (136) | RNAs (17) | Compounds (100) | Biological Roles (1) | Gene Ontology Terms (102) | Reactions (6) | EC Numbers (58) | Transcription Units (5) | Organisms (5) | Growth Media (2)
Pathways | Pathway pages contain: Depiction of metabolic pathway, of chromosomal locations of pathway genes, and of regulation of pathway genes. |
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- adenosine nucleotides degradation II (purine ribonucleotide/ribonucleoside metabolism)
- adenosine nucleotides degradation III (adenosine ribonucleotide/ribonucleoside metabolism)
- Class: Abscisic acid derivative Biosynthesis
- Class: Anhydromuropeptide Recycling
- Class: Epidermal Structures
- Class: Fatty Acid Derivative Biosynthesis
- Class: Fatty Acid Derivative Degradation
- Class: Phenylpropanoid Derivative Biosynthesis
- Class: Phenylpropanoid Derivative Degradation
- Class: Siderophore and Metallophore Biosynthesis
- Class: Sugar Derivative Biosynthesis
- Class: Sugar Derivative Degradation
- NAD salvage pathway IV (from nicotinamide riboside)
- salvage pathways of pyrimidine ribonucleotides (pyrimidine ribonucleotide/ribonucleoside metabolism)
- superoxide radicals degradation
Genes | Gene/Gene Product pages contain: chromosomal location of gene; depiction of its operon; link to genome browser; detailed summaries and citations; subunit structure (for protein complexes); cofactors, activators, and inhibitors (for enzymes), depiction of regulon (for transcriptional regulators), protein features. |
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Proteins | Gene/Gene Product pages contain: chromosomal location of gene; depiction of its operon; link to genome browser; detailed summaries and citations; subunit structure (for protein complexes); cofactors, activators, and inhibitors (for enzymes), depiction of regulon (for transcriptional regulators), protein features. |
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- 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase (phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase)
- 1-deoxy-D-xylulose 5-phosphate reductoisomerase (2C-methyl-D-erythritol 4-phosphate synthase)
- 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (polypeptide)
- 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (protein complex)
- 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (polypeptide)
- 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (protein complex)
- 3-deoxy-7-phosphoheptulonate synthase (7-phospho-2-keto-3-deoxy-D-arabino-heptonate D-erythrose-4-phosphate lyase(pyruvate phosphorylating))
- 3-hydroxy acid dehydrogenase YdfG (malonic semialdehyde reductase)
- 3-sulfolactaldehyde reductase (polypeptide)
- 3-sulfolactaldehyde reductase (protein complex)
- 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (polypeptide)
- 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (protein complex)
- 50S ribosomal subunit stability factor (Der)
- D-erythrose-4-phosphate dehydrogenase (polypeptide)
- D-erythrose-4-phosphate dehydrogenase (protein complex)
- Der GTPase-activating protein YihI (polypeptide)
- Der GTPase-activating protein YihI (protein complex)
- his operon leader peptide
- ilvBN operon leader peptide
- ilvXGMEDA operon leader peptide
- iraD leader peptide
- leu operon leader peptide
- N-ethylmaleimide reductase
- phe operon leader peptide
- pheST-ihfA operon leader peptide
- pyrBI operon leader peptide
- rho operon leader peptide
- rpoE leader peptide
- thr operon leader peptide
- tnaAB operon leader peptide
- trp operon leader peptide
- aldehyde reductase, NADPH-dependent
- alkyl hydroperoxide reductase
- alkyl hydroperoxide reductase, AhpC component
- alkyl hydroperoxide reductase, AhpF component
- anaerobic nitric oxide reductase flavorubredoxin
- anaerobic ribonucleoside-triphosphate reductase (ribonucleotide reductase)
- bifunctional AICAR transformylase/IMP cyclohydrolase (aminoimidazole carboxamide ribonucleotide transformylase)
- biotin sulfoxide reductase
- Class: β-D-glucosyluronate-[chondroitin/dermatan]
- Class: dermatan sulfate containing 4,6-di-O-sulfo-N-acetyl-D-galactosamine and L-iduronate 2-O-sulfate
- Class: dermatan sulfate containing 4-O-sulfo-N-acetyl-D-galactosamine and L-iduronate 2-O-sulfate-[core protein]
- Class: [dermatan sulfate] containing 4-O-sulfo-N-acetyl-D-galactosamine-[core protein]
- Class: [dermatan-sulfate] containing 2-O-sulfo-α-L-iduronate
- Class: a cleaved synthetic tetradecapeptide renin
- Class: a leader peptide
- Class: a leader sequence
- Class: a peptide (Peptide-Holder-Alternative)
- Class: a peptide (Peptides-holder)
- Class: a peptide with a leader sequence
- Class: a peroxiredoxin disulfide reductase
- Class: a reduced [peroxiredoxin disulfide reductase]
- Class: a synthetic tetradecapeptide renin substrate
- Class: a [chaperone-ADP]-[disordered-form scaffold protein] complex
- Class: a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex
- Class: a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex
- Class: a [disordered-form [Fe-S] cluster scaffold protein]
- Class: a [protein]-N6-(O3)-phospho-D-erythrulosyl-L-lysine
- Class: a [protein]-N6-(O3-phospho-D-erythrulosyl-L-lysine
- Class: a [protein]-N6-D-erythrulosyl-L-lysine
- Class: a [protein]-N6-D-erythrulosyl-L-lysine
- Class: a Der GTPase
- Class: an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex
- Class: an S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex
- Class: an inactive Der GTPase
- Class: an oxidized [peroxiredoxin disulfide reductase]
- Class: an undecaketide-[rifamycin-PKS]
- Class: tetraketide-[rifamycin PKS]
- cryptic type II secretion system prepilin peptidase (leader peptidase)
- cyclic di-GMP phosphodiesterase PdeR
- dihydroneopterin aldolase (2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine glycoaldehyde-lyase)
- dihydroneopterin triphosphate 2'-epimerase (D-erythro-dihydroneopterin triphosphate 2'-epimerase)
- dimanganese-tyrosyl radical cofactor maintenance flavodoxin NrdI (flavodoxin involved in dimanganese-tyrosyl radical cofactor maintenance for ribonucleotide reductase)
- dimethyl sulfoxide reductase
- dimethyl sulfoxide reductase subunit A
- dimethyl sulfoxide reductase subunit B
- dimethyl sulfoxide reductase subunit C
- disulfide reductase / organic hydroperoxide reductase (polypeptide)
- disulfide reductase / organic hydroperoxide reductase (protein complex)
- disulfide bond oxidoreductase YfcG (disulfide reductase) (polypeptide)
- disulfide bond oxidoreductase YfcG (disulfide reductase) (protein complex)
- DNA polymerase III, preinitiation complex (clamp-loader complex)
- DNA-binding transcriptional dual regulator SoxS (regulation of superoxide response regulon)
- ethanol dehydrogenase / alcohol dehydrogenase (ethanol dehydrogenase/acetaldehyde reductase)
- ferric-siderophore reductase FhuF
- free methionine-(R)-sulfoxide reductase (polypeptide)
- free methionine-(R)-sulfoxide reductase (protein complex)
- fused acetaldehyde-CoA dehydrogenase and Fe-dependent alcohol dehydrogenase (aldehyde reductase)
- GadE-RcsB DNA-binding transcriptional activator
- hexapeptide repeats-containing protein YrdA (polypeptide)
- hexapeptide repeats-containing protein YrdA (protein complex)
- imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (D-erythro imidazoleglycerol-phosphate dehydratase-histidinol phosphate phosphatase)
- lactaldehyde reductase
- leader peptide MgtL
- leader peptide SpeFL
- lipoprotein signal peptidase (leader peptidase II)
- membrane-bound flavocytochrome MsrQ (periplasmic protein-L-methionine sulfoxide reductase heme binding subunit)
- methionine sulfoxide reductase A
- methionine sulfoxide reductase B
- methylglyoxal reductase DkgA (isobutyraldehyde reductase)
- methylglyoxal reductase DkgB (4-nitrobenzaldehyde reductase)
- moderate conductance mechanosensitive channel YbiO (polypeptide)
- moderate conductance mechanosensitive channel YbiO (protein complex)
- NADP+-dependent aldehyde reductase
- NADP+-dependent aldehyde reductase YbbO
- NADPH-dependent aldehyde reductase Ahr (polypeptide)
- NADPH-dependent aldehyde reductase Ahr (protein complex)
- NADPH-dependent aldehyde reductase YqhD (polypeptide)
- NADPH-dependent aldehyde reductase YqhD (protein complex)
- nicotinamide riboside transporter
- oxidized glutaredoxin 1 (protein-disulfide reductase (glutathione))
- pentapeptide repeat-containing protein YjcF
- pentapeptide repeats-containing protein YjbI
- periplasmic protein-L-methionine sulfoxide reducing system
- phosphoglycerol transferase I (phosphatidylglycerol:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase)
- phosphoribosylamine—glycine ligase (glycinamide ribonucleotide synthetase)
- phosphoribosylformylglycinamide synthetase (formylglycinamide ribonucleotide synthetase)
- phosphoribosylglycinamide formyltransferase 1 (glycinamide ribonucleotide transformylase 1)
- phosphoribosylglycinamide formyltransferase 2 (glycinamide ribonucleotide transformylase 2)
- probable malonic semialdehyde reductase
- protein S-nitrosylase (nitric oxide reductase)
- protein-L-methionine sulfoxide reductase catalytic subunit MsrP
- putative fimbrial protein YdeR
- reduced flavorubredoxin (nitric oxide reductase)
- reduced glutaredoxin 1 (protein-disulfide reductase (glutathione))
- reduced glutaredoxin 2 (glutathione:protein disulfide reductase)
- ribonucleoside-diphosphate reductase 1 (ribonucleotide reductase I)
- RyhB-regulated fur leader peptide
- signal peptidase I (leader peptidase (signal peptidase I))
- tartronate semialdehyde reductase
- tartronate semialdehyde reductase 2 (polypeptide)
- tartronate semialdehyde reductase 2 (protein complex)
- trimethylamine N-oxide reductase 1
- trimethylamine N-oxide reductase 2
- trimethylamine-N-oxide reductase-specific chaperone
- xanthosine phosphorylase (nicotinamide riboside phosphorylase)
RNAs | Gene/Gene Product pages contain: chromosomal location of gene; depiction of its operon; link to genome browser; detailed summaries and citations; subunit structure (for protein complexes); cofactors, activators, and inhibitors (for enzymes), depiction of regulon (for transcriptional regulators), protein features. |
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- arfA-derived small regulatory RNA
- Class: a 5'-(5'-diphosphoadenosine)-(ribonucleoside)-[RNA]
- Class: a 5'-(N7-methyl 5'-triphosphoguanosine)-(2'-O-methyl-ribonucleotide)-ribonucleotide-[mRNA]
- Class: a 5'-phospho-ribonucleoside-[RNA]
- Class: a ribonucleic acid (RNA-Holder)
- Class: a tRNA (tRNA-Holder)
- Class: a [28S-rRNA]-3'-adenosine-2',3'-cyclophosphate (an [oligo-ribonucleotide RNA]-2',3' -cyclic nucleotide phosphate)
- Class: a [pre-mRNA]-3'-adenosine-2',3'-cyclophosphate (an [oligo-ribonucleotide RNA]-2',3' -cyclic nucleotide phosphate)
- Class: an mRNA (mRNA-Holder)
- Class: an rRNA (rRNA-Holder)
- Class: an [RNA]-3'-adenosine-2',3'-cyclophosphate (an [oligo-ribonucleotide RNA]-2',3' -cyclic nucleotide phosphate)
- Class: an [RNA]-3'-cytidine-2',3'-cyclophosphate (an [oligo-ribonucleotide RNA]-2',3' -cyclic nucleotide phosphate)
- Class: an [RNA]-3'-guanosine-2',3'-cyclophosphate (an [oligo-ribonucleotide RNA]-2',3' -cyclic nucleotide phosphate)
- Class: an [RNA]-3'-ribonucleoside-2',3'-cyclophosphate (an [oligo-ribonucleotide RNA]-2',3' -cyclic nucleotide phosphate)
- Class: an [RNA]-3'-ribonucleoside-3'-phosphate (a 3' phosphooligo-ribonucleotide RNA)
- Class: an [RNA]-3'-uridine-2',3'-cyclophosphate (an [oligo-ribonucleotide RNA]-2',3' -cyclic nucleotide phosphate)
- Class: small rDNA-derived RNA
Compounds | Compound pages contain: compound structural information, and links to all reactions and pathways in which the compound participates. |
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- β-D-ribulofuranose (β-D-erythro-2-pentulofuranose)
- β-nicotinamide D-ribonucleotide (β-nicotinamide ribonucleotide)
- 1-(β-D ribofuranosyl)nicotinamide (nicotinamide ribonucleoside)
- 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide (N-5-phosphoribosyl-formimino-5-amino-imidazole-4-carboxamide ribonucleotide)
- 2-C-methyl-D-erythritol 4-phosphate
- 2-C-methyl-D-erythritol-2,4-cyclodiphosphate
- 2-dehydro-3-deoxy-D-gluconate 6-phosphate (3-deoxy-D-erythro-hex-2-ulosonic acid 6-phosphate)
- 2-dehydro-3-deoxy-D-gluconate (3-deoxy-D-erythro-hex-2-ulosonic acid)
- 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
- 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
- 4-phospho-D-erythronate
- 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide (5-amino-4-imidazolecarboxamide ribotide)
- 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide (5-formylamidoimidazole-4-carboxamide ribonucleotide)
- D-erythro-1-(imidazol-4-yl)-glycerol 3-phosphate
- D-erythro-7,8-dihydroneopterin
- D-erythronate
- D-erythrose
- D-erythrose 4-phosphate
- a mechlorethamine derived bis-guanyl compound
- cephalosporin derivative compound 6
- Class: β-D-glucosyluronate-[chondroitin/dermatan]
- Class: 2-deoxy-D-ribose (2-deoxy-D-erythro-pentose)
- Class: dermatan sulfate containing 4,6-di-O-sulfo-N-acetyl-D-galactosamine and L-iduronate 2-O-sulfate
- Class: dermatan sulfate containing 4-O-sulfo-N-acetyl-D-galactosamine and L-iduronate 2-O-sulfate-[core protein]
- Class: dermatan sulfate disaccharide
- Class: dermatan-[core protein]
- Class: [dermatan sulfate] containing 4-O-sulfo-N-acetyl-D-galactosamine-[core protein]
- Class: [dermatan-sulfate] containing 2-O-sulfo-α-L-iduronate
- Class: [dermatan] containing N-acetyl-D-galactosamine
- Class: [dermatan]-6-O-sulfo-N-acetylgalactosamine
- Class: N-acetyl-β-D-galactosaminide-[chondroitin/dermatan]
- Class: Rhizobium leguminosarum bv. trifolii exopolysaccharide repeat unit
- Class: a 2-alkyl-dinitrophenol derivative
- Class: a 3' phosphooligonucleotide RNA
- Class: a 5-nitroisocytosine derivative
- Class: a carbohydrate acid derivative
- Class: a carbohydrate derivative
- Class: a carboxylate siderophore
- Class: a carboxylate derivative
- Class: a catecholate siderophore
- Class: a coenzyme A-activated compound (a CoA derivative)
- Class: a deoxynucleoside derivative
- Class: a diaryl sulfone derivative
- Class: a dihydrofolate derivative
- Class: a disaccharide derivative
- Class: a diterpenoid derivative
- Class: a DNA segment (DNA-Segment-Placeholder)
- Class: a dolichyl β-D-mannosyl phosphate (Dolichol, beta-D-mannopyranose deriv.)
- Class: a fatty acid derivative
- Class: a flavonol derivative
- Class: a generic polynucleotide substrate (Polynucleotide-Holder)
- Class: a glycerate derivative
- Class: a hederagenin monoglucoside
- Class: a hydroxamate siderophore
- Class: a hydroxylated fatty acid derivative
- Class: a jasmonate or derivative
- Class: a linoleate-derived metabolite
- Class: a monosaccharide derivative
- Class: a monoterpenoid derivative
- Class: a nonspecific small molecule (Compounds-Holder-Class)
- Class: a phosphoric acid derivative
- Class: a phosphorus oxoacid and derivatives
- Class: a phosphorus oxoacid derivative
- Class: a phytosiderophore
- Class: a polysaccharide derivative
- Class: a ribonucleic acid (RNA-Holder)
- Class: a sesquiterpenoid derivative
- Class: a siderophore-bound Fe(II)
- Class: a siderophore-bound Fe(III)
- Class: a single-stranded DNA (ssDNA-Holder)
- Class: a sugar phosphate derivative
- Class: a terpenoid derivative
- Class: a tetrahydrofolate derivative
- Class: a thiazoline siderophore
- Class: a tRNA (tRNA-Holder)
- Class: a [glycerolipid]-adrenate (an anderoyl-[glycerolipid])
- Class: an E. coli osmoregulated periplasmic glucan (OPG) (an E. coli membrane derived oligosaccharide)
- Class: an abscisic acid derivative
- Class: an alditol derivative
- Class: an amino acid or its derivative
- Class: an amino acid derivative
- Class: an indole derivative
- Class: an isoprenoid derivative
- Class: an mRNA (mRNA-Holder)
- Class: an oligosaccharide derivative
- Class: an oxoacid derivative
- Class: an rRNA (rRNA-Holder)
- Class: an [oligo-ribonucleotide RNA]-2',3'-cyclo nucleotide phosphate
- Class: D-ribulose (D-erythro-pentulose)
- Class: DNA (DNA-Holder)
- Class: glutathione and derivatives
- Class: methanopterin and derivatives
- DCB-PV (N(4)-alkylated 3,4-dichlorobenzyloxybenzyl derivative of glycopeptide putrescinyl vancomycin)
- dihydrofurano derivative
- hederagenin
- iodinated Bolton and Hunter derivative of ampicillin
- NADH (diphosphopyridine nucleotide reduced)
- phosphoribulosylformimino-AICAR-phosphate (phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribotide phosphate)
- reduced β-nicotinamide D-ribonucleotide (nicotinamide mononucleotide (reduced))
- superoxide (peroxide radical)
Biological Roles | Biological role pages contain links to compounds or proteins that fill that role, and to reactions involving the role. |
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Gene Ontology Terms | GO term pages contain: Parent and child terms, and lists of matching gene products. Note that only those terms that have one or more associated genes in the selected organism (or that have children with one or more associated genes) are listed. |
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- Class: GO:0001682 - tRNA 5'-leader removal
- Class: GO:0002128 - tRNA nucleoside ribose methylation
- Class: GO:0006465 - signal peptide processing
- Class: GO:0006575 - cellular modified amino acid metabolic process
- Class: GO:0006735 - NADH regeneration
- Class: GO:0006760 - folic acid-containing compound metabolic process
- Class: GO:0009237 - siderophore metabolic process
- Class: GO:0009396 - folic acid-containing compound biosynthetic process
- Class: GO:0009397 - folic acid-containing compound catabolic process
- Class: GO:0015891 - siderophore transport
- Class: GO:0015980 - energy derivation by oxidation of organic compounds
- Class: GO:0019290 - siderophore biosynthetic process
- Class: GO:0019430 - removal of superoxide radicals
- Class: GO:0019540 - catechol-containing siderophore biosynthetic process
- Class: GO:0033214 - siderophore-dependent iron import into cell
- Class: GO:0034258 - nicotinamide riboside transport
- Class: GO:0042219 - cellular modified amino acid catabolic process
- Class: GO:0042398 - cellular modified amino acid biosynthetic process
- Class: GO:0042430 - indole-containing compound metabolic process
- Class: GO:0042435 - indole-containing compound biosynthetic process
- Class: GO:0042436 - indole-containing compound catabolic process
- Class: GO:0042439 - ethanolamine-containing compound metabolic process
- Class: GO:0042537 - benzene-containing compound metabolic process
- Class: GO:0042558 - pteridine-containing compound metabolic process
- Class: GO:0042559 - pteridine-containing compound biosynthetic process
- Class: GO:0042560 - pteridine-containing compound catabolic process
- Class: GO:0042723 - thiamine-containing compound metabolic process
- Class: GO:0042724 - thiamine-containing compound biosynthetic process
- Class: GO:0044718 - siderophore transmembrane transport
- Class: GO:0046215 - siderophore catabolic process
- Class: GO:0072337 - modified amino acid transport
- Class: GO:0072490 - toluene-containing compound metabolic process
- Class: GO:0072491 - toluene-containing compound catabolic process
- Class: GO:0072521 - purine-containing compound metabolic process
- Class: GO:0072522 - purine-containing compound biosynthetic process
- Class: GO:0072523 - purine-containing compound catabolic process
- Class: GO:0072524 - pyridine-containing compound metabolic process
- Class: GO:0072525 - pyridine-containing compound biosynthetic process
- Class: GO:0072526 - pyridine-containing compound catabolic process
- Class: GO:0072527 - pyrimidine-containing compound metabolic process
- Class: GO:0072528 - pyrimidine-containing compound biosynthetic process
- Class: GO:0072529 - pyrimidine-containing compound catabolic process
- Class: GO:1900704 - regulation of siderophore biosynthetic process
- Class: GO:1900705 - negative regulation of siderophore biosynthetic process
- Class: GO:1901135 - carbohydrate derivative metabolic process
- Class: GO:1901136 - carbohydrate derivative catabolic process
- Class: GO:1901137 - carbohydrate derivative biosynthetic process
- Class: GO:1901264 - carbohydrate derivative transport
- Class: GO:1901568 - fatty acid derivative metabolic process
- Class: GO:1901569 - fatty acid derivative catabolic process
- Class: GO:1901570 - fatty acid derivative biosynthetic process
- Class: GO:1901571 - fatty acid derivative transport
- Class: GO:0003689 - DNA clamp loader activity
- Class: GO:0004362 - glutathione-disulfide reductase (NADPH) activity
- Class: GO:0004526 - ribonuclease P activity
- Class: GO:0004791 - thioredoxin-disulfide reductase (NADPH) activity
- Class: GO:0005085 - guanyl-nucleotide exchange factor activity
- Class: GO:0008106 - alcohol dehydrogenase (NADP+) activity
- Class: GO:0008113 - peptide-methionine (S)-S-oxide reductase activity
- Class: GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
- Class: GO:0008719 - dihydroneopterin triphosphate 2'-epimerase activity
- Class: GO:0008748 - N-ethylmaleimide reductase activity
- Class: GO:0008785 - alkyl hydroperoxide reductase activity
- Class: GO:0008912 - lactaldehyde reductase activity
- Class: GO:0009389 - dimethyl sulfoxide reductase activity
- Class: GO:0015035 - protein-disulfide reductase activity
- Class: GO:0015343 - siderophore-iron transmembrane transporter activity
- Class: GO:0015344 - siderophore uptake transmembrane transporter activity
- Class: GO:0016721 - oxidoreductase activity, acting on superoxide radicals as acceptor
- Class: GO:0016855 - racemase and epimerase activity, acting on amino acids and derivatives
- Class: GO:0016856 - racemase and epimerase activity, acting on hydroxy acids and derivatives
- Class: GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives
- Class: GO:0016966 - nitric oxide reductase activity
- Class: GO:0019153 - protein-disulfide reductase (glutathione) activity
- Class: GO:0032843 - hydroperoxide reductase activity
- Class: GO:0033743 - peptide-methionine (R)-S-oxide reductase activity
- Class: GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity
- Class: GO:0033745 - L-methionine-(R)-S-oxide reductase activity
- Class: GO:0034257 - nicotinamide riboside transmembrane transporter activity
- Class: GO:0036361 - racemase activity, acting on amino acids and derivatives
- Class: GO:0036456 - L-methionine-(S)-S-oxide reductase activity
- Class: GO:0047134 - protein-disulfide reductase (NAD(P)H) activity
- Class: GO:0050262 - ribosylnicotinamide kinase activity
- Class: GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity
- Class: GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
- Class: GO:0050626 - trimethylamine-N-oxide reductase (cytochrome c) activity
- Class: GO:0052660 - R-lactaldehyde reductase activity
- Class: GO:0052661 - S-lactaldehyde reductase activity
- Class: GO:0061596 - 3-sulfolactaldehyde reductase activity
- Class: GO:0072341 - modified amino acid binding
- Class: GO:0072349 - modified amino acid transmembrane transporter activity
- Class: GO:0097367 - carbohydrate derivative binding
- Class: GO:0097718 - disordered domain specific binding
- Class: GO:0102039 - NADH-dependent peroxiredoxin activity
- Class: GO:1901505 - carbohydrate derivative transmembrane transporter activity
- Class: GO:1901567 - fatty acid derivative binding
- Class: GO:0005971 - ribonucleoside-diphosphate reductase complex
- Class: GO:0009321 - alkyl hydroperoxide reductase complex
- Class: GO:0009390 - dimethyl sulfoxide reductase complex
- Class: GO:0043846 - DNA polymerase III, clamp loader complex
- Class: GO:1902515 - thioredoxin-disulfide reductase complex
- Class: GO:1904852 - trimethylamine-N-oxide reductase (cytochrome c) complex
Reactions | Reaction pages contain: reaction equation with chemical structures, links to all enzymes that catalyze the reaction, and all pathways in which the reaction participates. |
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- 2-C-methyl-D-erythritol 4-phosphate + CTP + H+ → 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol + diphosphate
- 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol + ATP → 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol + ADP + H+
- a [prolipoprotein]-S-1,2-diacyl-sn-glyceryl-L-cysteine + H2O → an (S-diacyl-sn-glyceryl)-L-cysteinyl-[apolipoprotein] + a lipoprotein signal peptide (BACTERIAL LEADER PEPTIDASE I)
- NADP+ + an alcohol ↔ an aldehyde + NADPH + H+ (Aldehyde reductase (NADPH))
- peptide with a leader sequence + H2O → peptide + leader sequence
- trimethylamine N-oxide[periplasm] + a menaquinol[inner membrane] + H+[periplasm] → a menaquinone[inner membrane] + trimethylamine[periplasm] + H2O[periplasm] (Trimethylamine-N-oxide reductase (menaquinone))
EC Numbers | EC Number pages contain: links to reaction and enzymes associated with the EC number in this database, names, description, citations, etc. from the Enzyme Commission ontology. |
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- 1.1.1.1 -- alcohol dehydrogenase (aldehyde reductase)
- 1.1.1.2 -- alcohol dehydrogenase (NADP+) (aldehyde reductase (NADPH2))
- 1.1.1.21 -- aldose reductase (aldehyde reductase (misleading))
- 1.1.1.55 -- lactaldehyde reductase (NADPH)
- 1.1.1.60 -- 2-hydroxy-3-oxopropionate reductase (tartronate semialdehyde reductase)
- 1.1.1.77 -- lactaldehyde reductase
- 1.1.1.91 -- aryl-alcohol dehydrogenase (NADP+) (NADPH-linked benzaldehyde reductase)
- 1.1.1.267 -- 1-deoxy-D-xylulose-5-phosphate reductoisomerase (2-C-methyl-D-erythritol-4-phosphate:NADP+ oxidoreductase (isomerizing))
- 1.1.1.290 -- 4-phosphoerythronate dehydrogenase (4-phospho-D-erythronate:NAD+ 2-oxidoreductase)
- 1.1.98.6 -- ribonucleoside-triphosphate reductase (formate) (anaerobic ribonucleotide reductase)
- 1.2.1.72 -- erythrose-4-phosphate dehydrogenase (D-erythrose 4-phosphate:NAD+ oxidoreductase)
- 1.5.1.30 -- flavin reductase (NADPH) (riboflavin mononucleotide (reduced nicotinamide adenine dinucleotide phosphate) reductase)
- 1.5.1.34 -- 6,7-dihydropteridine reductase (dihydropteridine (reduced nicotinamide adenine dinucleotide) reductase)
- 1.5.1.41 -- riboflavin reductase [NAD(P)H] (riboflavin mononucleotide reductase (ambiguous))
- 1.5.1.54 -- methylenetetrahydrofolate reductase (NADH) (methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase)
- 1.7.2.3 -- trimethylamine-N-oxide reductase
- 1.8.1.4 -- dihydrolipoyl dehydrogenase (lipoamide reductase)
- 1.8.1.7 -- glutathione-disulfide reductase
- 1.8.1.9 -- thioredoxin-disulfide reductase
- 1.8.4.2 -- protein-disulfide reductase (glutathione)
- 1.8.4.11 -- peptide-methionine (S)-S-oxide reductase
- 1.8.4.12 -- peptide-methionine (R)-S-oxide reductase
- 1.8.4.13 -- L-methionine (S)-S-oxide reductase
- 1.8.4.14 -- L-methionine (R)-S-oxide reductase
- 1.8.4.16 -- thioredoxin:protein disulfide reductase
- 1.8.5.3 -- respiratory dimethylsulfoxide reductase
- 1.11.1.26 -- NADH-dependent peroxiredoxin (alkyl hydroperoxide reductase)
- 1.16.1.9 -- ferric-chelate reductase (NADPH) (Fe(II)-siderophore:NADP+ oxidoreductase)
- 1.16.1.10 -- ferric-chelate reductase [NAD(P)H] (Fe(II)-siderophore:NAD(P)+ oxidoreductase)
- 1.17.4.1 -- ribonucleoside-diphosphate reductase (ribonucleotide reductase (ambiguous))
- 1.18.1.1 -- rubredoxin—NAD+ reductase (rubredoxin-nicotinamide adenine dinucleotide reductase)
- 1.18.1.3 -- ferredoxin—NAD+ reductase (ferredoxin-nicotinamide adenine dinucleotide reductase)
- 2.1.2.2 -- phosphoribosylglycinamide formyltransferase 1 (glycinamide ribonucleotide transformylase)
- 2.1.2.3 -- phosphoribosylaminoimidazolecarboxamide formyltransferase (5-amino-4-imidazolecarboxamide ribonucleotide transformylase)
- 2.4.2.4 -- thymidine phosphorylase (animal growth regulators, blood platelet-derived endothelial cell growth factors)
- 2.5.1.54 -- 3-deoxy-7-phosphoheptulonate synthase (phosphoenolpyruvate:D-erythrose-4-phosphate C-(1-carboxyvinyl)transferase (phosphate-hydrolysing, 2-carboxy-2-oxoethyl-forming))
- 2.7.1.148 -- 4-(cytidine 5′-diphospho)-2-C-methyl-D-erythritol kinase
- 2.7.7.60 -- 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
- 2.7.8.20 -- phosphatidylglycerol—membrane-oligosaccharide glycerophosphotransferase (phosphatidylglycerol:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase)
- 2.7.8.21 -- membrane-oligosaccharide glycerophosphotransferase (membrane-derived-oligosaccharide-6-(glycerophospho)-D-glucose:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase)
- 3.2.2.1 -- purine nucleosidase (purine-nucleoside ribohydrolase)
- 3.2.2.8 -- ribosylpyrimidine nucleosidase (pyrimidine-nucleoside ribohydrolase)
- 3.2.2.23 -- DNA-formamidopyrimidine glycosylase (DNA glycohydrolase [2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimide releasing])
- 3.4.21.89 -- signal peptidase I (leader peptidase I)
- 3.4.23.36 -- signal peptidase II (premurein-leader peptidase)
- 3.6.5.3 -- protein-synthesizing GTPase (peptide-release or termination factor)
- 4.1.2.25 -- dihydroneopterin aldolase (2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine glycolaldehyde-lyase)
- 4.2.1.19 -- imidazoleglycerol-phosphate dehydratase (D-erythro-1-(imidazol-4-yl)glycerol-3-phosphate hydro-lyase [3-(imidazol-4-yl)-2-oxopropyl-phosphate-forming])
- 4.3.2.10 -- imidazole glycerol-phosphate synthase (5-[(5-phospho-1-deoxy-D-ribulos-1-ylamino)methylideneamino]-1-(5-phospho-β-D-ribosyl)imidazole-4-carboxamide D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate-lyase (L-glutamine-hydrolysing; 5-amino-1-(5-phospho-β-D-ribosyl)imidazole-4-carboxamide-forming))
- 4.6.1.12 -- 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
- 5.1.99.7 -- dihydroneopterin triphosphate 2′-epimerase (D-erythro-7,8-dihydroneopterin triphosphate epimerase)
- 6.3.1.21 -- phosphoribosylglycinamide formyltransferase 2 (glycinamide ribonucleotide transformylase 2)
- 6.3.2.6 -- phosphoribosylaminoimidazolesuccinocarboxamide synthase (5-aminoimidazole-4-N-succinocarboxamide ribonucleotide synthetase)
- 6.3.4.13 -- phosphoribosylamine—glycine ligase (glycinamide ribonucleotide synthetase)
- 6.3.5.3 -- phosphoribosylformylglycinamidine synthase (formylglycinamide ribonucleotide amidotransferase)
- Class: 5.1.1 -- Acting on amino acids and derivatives
- Class: 5.1.2 -- Acting on hydroxy acids and derivatives
- Class: 5.1.3 -- Acting on carbohydrates and derivatives
Transcription Units | Transcription Unit pages contain: Detailed information about gene regulation including location of promoter and transcription factor binding sites, and regulators that control the promoter. |
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Organisms | Organisms pages contain: Detailed information about the database of an organism. |
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- Class: Burkholderiaceae (Family)
- Class: Burkholderiales (Order)
- Class: Micrococcus luteus (Species) (Burkholderia sp. 2385)
- Class: Peloderinae (Subfamily)
- Class: Pseudomonas putida (Species) (Arthrobacter siderocapsulatus)
Growth Media |
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Page generated by Pathway Tools version 28.5 (software by SRI International) on Thu Feb 13, 2025, BIOCYC13A.
EcoCyc version 28.5.